Export Seurat object to 10x-style triple files
Usage
write_10x_triple(
seu,
out_dir,
assay = "RNA",
slot = "counts",
compress = TRUE,
overwrite = FALSE
)
Arguments
- seu
Seurat object.
- out_dir
Output directory.
- assay
Assay name (default "RNA").
- slot
Slot/layer to export: "counts" (recommended) or "data".
- compress
Logical; if TRUE, write gzipped files.
- overwrite
Logical; if TRUE, overwrite existing files.
Value
Invisibly returns a list of output file paths.