Plot QC metrics — plot_qc • leo.sc

Generates violin and scatter plots for QC features and saves them as PDFs.

Usage

plot_qc(
  seurat_obj,
  out_path,
  prefix = "before_",
  save_plot = TRUE,
  verbose = TRUE,
  ...
)

Arguments

seurat_obj: A Seurat object with QC metrics.
out_path: Character. Directory to save plots.
prefix: Character. Filename prefix. Default: "before_".
save_plot: Logical. Whether to save the plots. Default: TRUE.
verbose: Logical. Whether to print leo.log messages. Default: TRUE.
...: Additional arguments passed to methods.

Value

Invisible NULL.